PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009616884.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 565aa    MW: 61866.9 Da    PI: 6.5839
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009616884.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.49.7e-31310368259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+
  XP_009616884.1 310 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDKTILITTYEGNHNHP 368
                     7***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.3E-34294370IPR003657WRKY domain
SuperFamilySSF1182909.15E-28302370IPR003657WRKY domain
PROSITE profilePS5081129.838304370IPR003657WRKY domain
SMARTSM007746.5E-37309369IPR003657WRKY domain
PfamPF031069.1E-27311368IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 565 aa     Download sequence    Send to blast
MANGSGLFFD PDPTTLFLEY PSSKDHHFFY KLLKLEPFLS SNNIMDSLTK NMSSSPPTTI  60
QFPVNLINDH DQKRPILDEM DFFAAKEDVN CKDTDERKEF NKPLELDFNI NTGLQLLTAN  120
TSSDQSIVED GLSPASSEDR RTKTELAVLQ AELERINGEN RHLRDMLNQV TTNCSTLQMQ  180
LTMIKQKQQH DHVEQDDKGD EIKQQYQSSQ MRPRQFMDLG RLANEASLSS SEGRRSWEQS  240
RSPPMNIVES GSSDREDSPE KGLSCWGPNK VPRVAGNESK SSTTVDQATE ATIRKARVSV  300
RARSEAPMIT DGCQWRKYGQ KMAKGNPCPR AYYRCTMAAG CPVRKQVQRC AEDKTILITT  360
YEGNHNHPLP PAAAAMASTT SSAARMLLSG SMPSADGLMS SNILARTLLP CSSSIATISA  420
SAPFPTVTLD LTQTSNPLQF KGPSNQSQFP FQNPHQNSPG NPIALLPQIF GQALYNQSKF  480
SGLQMSQNLS TLPSIGDTVN VLTADPNFAA ALATAVTSLI GNSHHSNNVT NNNTSAATTP  540
SNNNETINSS NGNNKVNSSS TSPAY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-22296372176WRKY transcription factor 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009616884.10.0PREDICTED: probable WRKY transcription factor 31
SwissprotQ9XEC31e-140WRK42_ARATH; Probable WRKY transcription factor 42
TrEMBLV9XQY30.0V9XQY3_CAPAN; WRKY6
STRINGSolyc07g051840.2.10.0(Solanum lycopersicum)
STRINGPGSC0003DMT4000388520.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9452492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04450.11e-122WRKY family protein